BVTech Plasmid software is designed to be a DNA plasmid drawing application.
You can use it to plan your DNA cloning, draw high quality plasmid maps, analyse your DNA sequencing data, align sequences, convert sequence formats among EMBL, GeneBank, FASTA, IG, and PLAIN with options of upper/lower case, reverse compliment, and view both .ab1 and .scf chromat file formats and edit the sequence based on peaks and the aligned sequence.
You can label the plasmid with genes and restriction sites in different colors, text, and styles. BVTech Plasmid provides many drawing objects, includs lines, arrows, rectangles, circles, and text boxes. Drawing objects can be used for general annotation or to add extra labels to a map.

 

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– DNA Sequencing data analysis and editing: Sequence alignment, clipping and splicing, sequence conversion, peak detection, sequence filtering, sequence number assignment, reference sequence numbering, or renumbering.
– DNA cloning: Plasmid design, validation, and map drawing.
– Visualization of DNA chromatogram for cloning validation and sequence confirmation.
– Making indexed plasmid map for detailed mapping of the plasmid.
– Make sure the mapped order of the plasmid is consistent with the sequence alignment.
– Export the cloned plasmid map for downstream DNA processing.
– Print and scale all the information on the map.
– Draw the restriction maps, e.g., AscI, AgeI, and HindIII, directly on the plasmid map.
– Copy, edit, print, or export the original sequences in.ab1,.scf and.mol file formats.
– Collapse/expand the exons of a gene and compare the collapsed and original sequences.
– Annotate the plasmid map.
– Put all the information on the plasmid map in an email message.
– Rescale, label, and make the splicing with the paired sequence in either orientation.
– Export the chromatogram sequence for alignment and edit the sequencing data.
– Show the restriction map of the plasmid.
– Import.shp files for mapping the plasmid on a chromosome map.
– Export the whole chromosome map in.shp file format.
– Export the.shp file as a.gff file for downstream analysis, e.g., viewing with Genome Maps or other bioinformatics software.
– Export the whole chromosome map as a.map file format for downstream analysis.
– Export the whole chromosome map as a.svg file format for downstream analysis.
– Export the.svg file as a.pdf or.eps file format for downstream analysis.
– Import the whole chromosome map from a.pdf,.eps, or.svg file.
– Import the whole chromosome map from a.map file.
– Merge two or more chromosome maps together to get a single chromosome map.
– Generate the.shp file for visualizing the merged chromosome map.
– Insert the.shp file into any genome map software, e.g., Genome Maps.
– Import the.shp file into plasmid map

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– Overlay your BAC or FPC for editing
– Select from standard and user defined BAC or FPC or enter your own
– Include tag information, number of bands for visualization, DNA sequences, etc.
– Include restriction maps
– Align sequences
– Draw plasmids for manual drawing
– Capture any sequence and automatically align with the rest of the sequences
– Convert any sequencing file to the.ab1 format (converting is required prior to importing sequences into BVTech Plasmid)
– Copy selected peaks from sequence alignment into BVTech Plasmid (option for sequence-based alignment)
– Copy sequence from alignments into BVTech Plasmid (option for sequence-based alignment)
– Edit the sequence based on peaks and the aligned sequence
– Plot contour plots for the aligned sequence, with peaks, restriction sites, and labels
– Export map to BML, XML, or SVG format
– Export multiple map files as one EMF
– Export text features for data import into Visible Molecule
– Export genes, restriction sites, and coordinates to Plasmid Tree
– Export genes to Fasta files
– Export sequences for FASTA file conversion
– Export sequences to PLAIN and IG formats for alignment in other programs
– Create plasmids and export to.ps and.emf
– View maps as a 2D scatter plot and 3D and 4D plots
– View 2D and 3D gene tree maps, restriction map, and.ps and.emf files
– View.txt,.seq,.gff, and.ab1 files as they are aligned
– View.bim files as they are aligned
– View chromat files as they are aligned
– Allow editing of restriction sites in peaks (Riksachs’ R)
– Check for ligatable restriction sites at ends of insert and plasmid sequence
– Align sequences based on peak positions (Integrative Genomics Viewer)
– Align sequences based on peaks (integrative genomics viewer)
– Base call verification
– Analysis of variant calling
– Code conversion:.ab1,.scf, and.gbk (Sequencing center format files)
– Peak detection
– Peak filtering
– Peak filtering using BVTech Plasmid functions, including optional image scaling
– Peak optimization
– Align peaks based on peak coordinates and/or sequences
– Al

What’s New in the?

BVTech Plasmid contains several tools to design and analyze DNA plasmids.
You can plan your plasmid cloning.
Draw a plasmid map with sequence view and get top and bottom DNA maps.
Draw a DNA sequence with different peaks, and view the sequences in alignment in BVAnalyzer.
Label plasmids with genes and restriction sites in different colors, text, and styles.
Edit the sequence based on peaks and the aligned sequence.

Version 4.0

Version 4.0 has completely rewritten the software. It contains new features and improved interface.

The trial is fully functional with no expiration or limitation.
The software is used to design, plan, draw and label DNA plasmids.

Version 3.0

Version 3.0 is the most advanced version of BVTech Plasmid.
Now you can plan plasmids with different colors, text, and styles and with additional elements like the gene map, restriction sites, start and stop codons.

Version 2.0

Version 2.0 is a stable version of BVTech Plasmid.
Now you can edit the plasmid sequence in the BVAnalyzer.
You can compare two plasmids and the sequence of the sequence of interest.
Now there are three new drawing objects to draw the plasmid and the restriction sites.

Version 1.0

Version 1.0 is the first version of BVTech Plasmid.
You can do the following:
Draw a plasmid map with sequence view.
Plan the plasmids with restriction sites in the vector map.
Add the restriction sites to the DNA sequence view.
The plasmids can have labels with different colors, text, and styles.

Top of Form

This page shows the top of the form.

DNA Sequences

This is a list of DNA sequences in the selected file.

Up

This is a list of DNA sequences in the selected file.

Down

This is a list of DNA sequences in the selected file.

Plasmid Design

This is a plasmid design form.
This form has no items, but it can be used to plan your plasmid cloning.

All Menu

This is the first menu of BVTech Plasmid.

File – Save

This is the second menu of BVTech Plasmid.

Sequence – New

This is the third menu of BVTech Plasmid.

Sequence – Open

This is the fourth menu of BVTech Plasmid.
This menu is used to open the sequence files.

Image – New

This is the fifth menu of BVTech Plasmid.

Image – Open

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System Requirements For BVTech Plasmid:

Minimum:
OS: Windows XP/Vista/7
CPU: 1 GHz
RAM: 512 MB
Hard Drive: ~1GB (for XP)
Latest Flash Player: 11.2.202.292 (for Windows) or 11.3.x.x (for Mac)
Web Browser: Firefox 3.6+
Keyboard: English International (US)
Video Card: 8 MB DirectX 9 compliant video card
Recommended:
CPU:

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